Workshop on Infectious Diseases | (smr 2279) (23 January 2012

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Workshop on Infectious Diseases | (smr 2279)

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Monday, 23 January 2012
- 09:00 - 09:30 WELCOME
  - 09:00 WELCOME 30'
- 09:00 - 10:00 Heterogeneities in Contact Structure
  - 09:00 Heterogeneities in Contact Structure 1h0'
    
    Speaker: Pej Rohani (University of Cambridge, UK)
- 09:00 - 10:00 Seasonality
  - 09:00 Seasonality 1h0'
    
    Speaker: Pej Rohani (University of Cambridge, UK)
- 09:30 - 10:30 Introduction to Transmission Models
  - 09:30 Introduction to Transmission Models 1h0'
    
    Speaker: Pej Rohani (University of Cambridge, UK)
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Lab:Maximum Likelihood
  - 10:15 Lab:Maximum Likelihood 1h0'
    
    Speaker: Aaron King (University of Michigan, USA)
- 10:15 - 11:15 Age Structure
  - 10:15 Age Structure 1h0'
    
    Speaker: Pej Rohani (University of Cambridge, UK)
- 10:30 - 10:45 Discussion Break
  - 10:30 Discussion Break 15'
- 10:45 - 11:45 The Many Faces of R0
  - 10:45 The Many Faces of R0 1h0'
    
    Speaker: Pej Rohani (University of Cambridge, UK)
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 More Realistic Models
  - 11:30 More Realistic Models 1h0'
    
    Speaker: Pej Rohani (University of Cambridge, UK)
- 11:30 - 12:30 Unexpected consequences of culling on the selection of strain virulence
  - 11:30 Unexpected consequences of culling on the selection of strain virulence 1h0'
    
    Speaker: Giulio De Leo (University of Stanford, USA)
- 11:45 - 12:30 Introduction to R and ODE integration
  - 11:45 Introduction to R and ODE integration 45'
    
    Speaker: Aaron King (University of Michigan, USA)
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 15:00 Mathematical Analysis of Transmission models (SIR, SIS, SEIR)
  - 14:00 Mathematical Analysis of Transmission models (SIR, SIS, SEIR) 1h0'
    
    Speaker: Pej Rohani (University of Cambridge, UK)
- 14:00 - 15:00 TBD
  - 14:00 TBD 1h0'
    
    Speaker: Andy Dobson (Princeton University, USA)
- 14:00 - 15:45 Theory and Simulation of individual based stochastic models I
  - 14:00 Theory and Simulation of individual based stochastic models I 1h45'
    
    Speaker: Matteo Marsili (ICTP, Trieste)
- 15:00 - 15:45 Introduction to Core Groups
  - 15:00 Introduction to Core Groups 45'
- 15:00 - 16:00 Seminar on rabies
  - 15:00 Seminar on rabies 1h0'
    
    Speaker: Andy Dobson (Princeton University, USA)
- 15:45 - 16:00 Coffee Break
  - 15:45 Coffee Break 15'
- 15:45 - 16:00 Coffee Break
  - 15:45 Coffee Break 15'
- 16:00 - 16:15 Coffee break
  - 16:00 Coffee break 15'
- 16:00 - 17:30 Lab: Stochasticity
  - 16:00 Lab: Stochasticity 1h30'
    
    Speaker: Aaron King (University of Michigan, USA)
- 16:00 - 17:30 Lab: Bifurcation Diagrams & Stochastics
  - 16:00 Lab: Bifurcation Diagrams & Stochastics 1h30'
    
    Speaker: Aaron King (University of Michigan, USA)
- 16:15 - 17:30 Lab:Parameter estimation (least squares)
  - 16:15 Lab:Parameter estimation (least squares) 1h15'
    
    Speaker: Aaron King (University of Michigan, USA)
Thursday, 26 January 2012
- 09:00 - 10:00 Vector-transmitted diseases
  - 09:00 Vector-transmitted diseases 1h0'
    
    Speaker: Andy Dobson (Princeton University, USA)
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Getting a free ride on poultry farms: How highly pathogenic avian influenza may persist in spite of its virulence
  - 10:15 Getting a free ride on poultry farms: How highly pathogenic avian influenza may persist in spite of its virulence 1h0'
    
    Speaker: Giulio De Leo (University of Stanford, USA)
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 Environmental factors in the nematode's life cycle: the free-living stage
  - 11:30 Environmental factors in the nematode's life cycle: the free-living stage 1h0'
    
    Speaker: Graciela Canziani (Universidad Nacional del Centro de la Provincia, Buenos Aires)
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 15:00 Core Groups discussions
  - 14:00 Core Groups discussions 1h0'
- 15:00 - 15:45 Participants' Talks
  - 15:00 Participants' Talks 45'
- 15:45 - 16:00 Coffee Break
  - 15:45 Coffee Break 15'
- 16:00 - 17:30 Theory and Simulation of individual based stochastic models II
  - 16:00 Theory and Simulation of individual based stochastic models II 1h30'
    
    Speaker: Matteo Marsili (ICTP, Trieste)
Friday, 27 January 2012
- 09:00 - 10:00 Macro-parasites. The basic models; examples of applications
  - 09:00 Macro-parasites. The basic models; examples of applications 1h0'
    
    Speaker: Andy Dobson (Princeton University, USA)
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Simple mathematical models of the relationship between biodiversity and diseases
  - 10:15 Simple mathematical models of the relationship between biodiversity and diseases 1h0'
    
    Speaker: Giulio De Leo (University of Stanford, USA)
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 Including qualitative data in a mathematical model through the use of fuzzy rule-based inference systems
  - 11:30 Including qualitative data in a mathematical model through the use of fuzzy rule-based inference systems 1h0'
    
    Speaker: Graciela Canziani (Universidad Nacional del Centro de la Provincia, Buenos Aires)
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 15:00 Core Groups discussions
  - 14:00 Core Groups discussions 1h0'
- 15:00 - 15:45 Participants' Talks
  - 15:00 Participants' Talks 45'
- 15:45 - 16:00 Coffee Break
  - 15:45 Coffee Break 15'
- 16:00 - 17:30 Seminar on recent research on macroparasites or/and parasites in food webs
  - 16:00 Seminar on recent research on macroparasites or/and parasites in food webs 1h30'
    
    Speaker: Andy Dobson (Princeton University, USA)
Monday, 30 January 2012
- 09:00 - 10:00 Malaria dynamics and climate change
  - 09:00 Malaria dynamics and climate change 1h0'
    
    Speaker: Mercedes Pascual (University of Michigan, USA)
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Poverty traps formed by the ecology of infectious disease
  - 10:15 Poverty traps formed by the ecology of infectious disease 1h0'
    
    Speaker: Matt Bonds (Harvard University, USA)
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 Modelling malaria with dynamical models: The VECTRI model
  - 11:30 Modelling malaria with dynamical models: The VECTRI model 1h0'
    
    Speaker: Adrian Tompkins (ICTP, Trieste)
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 16:00 Seminar/Lab on the VECTRI model
  - 14:00 Seminar/Lab on the VECTRI model 2h0'
    
    Speaker: Adrian Tomkins (ICTP, Trieste)
- 16:00 - 16:15 Coffee Break
  - 16:00 Coffee Break 15'
- 16:15 - 17:30 Core Group Discussions
  - 16:15 Core Group Discussions 1h15'
Tuesday, 31 January 2012
- 09:00 - 10:00 Cholera dynamics and climate variability
  - 09:00 Cholera dynamics and climate variability 1h0'
    
    Speaker: Mercedes Pascual (University of Michigan, USA)
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Disease ecology and the latitudinal gradient in income
  - 10:15 Disease ecology and the latitudinal gradient in income 1h0'
    
    Speaker: Matt Bonds (Harvard University, USA)
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 Epidemic malaria and climate variability: a dynamic perspective
  - 11:30 Epidemic malaria and climate variability: a dynamic perspective 1h0'
    
    Speaker: Mercedes Pacsual (University of Michigan, USA)
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 15:00 Environmental factors in the nematode's life cycle: the parasitic stage and hypobiosis
  - 14:00 Environmental factors in the nematode's life cycle: the parasitic stage and hypobiosis 1h0'
    
    Speaker: Graciela Canziani (Universidad Nacional del Centro de la Provincia, Buenos Aires)
- 15:00 - 16:00 Core Groups discussions
  - 15:00 Core Groups discussions 1h0'
- 16:00 - 16:15 Coffee Break
  - 16:00 Coffee Break 15'
- 16:15 - 17:30 Core Groups discussions continued
  - 16:15 Core Groups discussions continued 1h15'
Wednesday, 1 February 2012
- 09:00 - 10:00 'Environmental factors in the nematode's life cycle: control strategies
  - 09:00 'Environmental factors in the nematode's life cycle: control strategies 1h0'
    
    Speaker: Graciela Canziani (Universidad Nacional del Centro de la Provincia, Buenos Aires)
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Participants' Talks
  - 10:15 Participants' Talks 1h0'
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 Allometric scaling of wildlife diseases
  - 11:30 Allometric scaling of wildlife diseases 1h0'
    
    Speaker: Giulio De Leo (Stanford University, USA)
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 15:00 TBA
  - 14:00 TBA 1h0'
- 15:00 - 16:00 Core Groups discussions
  - 15:00 Core Groups discussions 1h0'
- 16:00 - 16:15 Coffee Break
  - 16:00 Coffee Break 15'
- 16:15 - 17:30 Core Groups discussions continued
  - 16:15 Core Groups discussions continued 1h15'
Thursday, 2 February 2012
- 09:00 - 10:00 Participants' Talks
  - 09:00 Participants' Talks 1h0'
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Participants' Talks
  - 10:15 Participants' Talks 1h0'
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 TBA
  - 11:30 TBA 1h0'
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 16:00 Core Groups preparation of presentations
  - 14:00 Core Groups preparation of presentations 2h0'
- 16:00 - 16:15 Coffee Break
  - 16:00 Coffee Break 15'
- 16:15 - 17:30 Core Groups preparation of presentations
  - 16:15 Core Groups preparation of presentations 1h15'
Friday, 3 February 2012
- 09:00 - 10:00 Core Groups presentations
  - 09:00 Core Groups presentations 1h0'
- 10:00 - 10:15 Discussion Break
  - 10:00 Discussion Break 15'
- 10:15 - 11:15 Core Groups presentations
  - 10:15 Core Groups presentations 1h0'
- 11:15 - 11:30 Discussion Break
  - 11:15 Discussion Break 15'
- 11:30 - 12:30 Synthesis and Open areas
  - 11:30 Synthesis and Open areas 1h0'
- 12:30 - 14:00 LUNCH
  - 12:30 LUNCH 1h30'
- 14:00 - 15:00 Certificates and Farewell
  - 14:00 Certificates and Farewell 1h0'