9th Workshop on Collaborative Scientific Software Development and Management of Open Source Scientific Packages | (smr 3696) (28 November 2022

Administration

Description

An ICTP Meeting in presence

Writing software has become central to research in many fields of science. This school aims to give early-career scientists an introduction to a variety of topics that help them to write efficient, clean, maintainable and long-lived code that is useful beyond solving an immediate problem. In a mixture of talks and many hands-on sessions, the focus lies on showing best practices and building fundamental skills in creating, extending and collaborating on modular and reusable software.

Topics:

Python / shell scripts as glue code
Introduction to computer architectures and software optimization
Modular, reusable software design
Effective collaborative development with multiple co-authors
Version control and release cycles
Automated testing frameworks
Structured documentation
Management of open source scientific packages
Continuous integration & deployment
Visualisation as a development tool
Conversational development

Lecturers:
A. CORBETTA, Eindhoven University of Technology, The Netherlands
A. FARNUDI, École Normale Supérieure de Lyon, France
L. GARRISON, University of Bergen, Norway
I. GIROTTO, ICTP, Trieste, Italy
D. GRELLSCHEID, University of Bergen, Norway

Prerequisites: Participants are expected to have some experience in a programming language, this course is not suitable for beginners in programming.

Grants: A limited number of grants are available to support the attendance of selected participants, with priority given to participants from developing countries. There is no registration fee.

Material

Final list of participants Group photo Link to Teaching material Poster

9th Workshop on Collaborative Scientific Software Development and Management of Open Source Scientific Packages | (smr 3696)

Go to day

Monday, 28 November 2022

08:30 - 10:30

The whole material is available on the Gitlab server at THIS LINK

08:30 Workshop Registration formalities 2h0' ( Adriatico Guest House - (Lower Level 1) )

REGISTRATION: Upon arrival, Visitors not staying in the ICTP Guest Houses, are kindly requested to complete registration formalities at the Adriatico Guesthouse, Registration Desk (Lower level) from 8.30 till 10.30.

10:30 - 18:30

Location:

Adriatico Guest House - Giambiagi Lecture Hall

10:30 Welcome / Overview / Software Development Basics 15'

Speaker: Ivan GIROTTO (ICTP, Italy)
10:45 Coffee break 30'
11:15 Get-to-know session 1h15'
12:30 Lunch break 1h30'

14:00 Intro to Python 1h0'

Speaker:	David GRELLSCHEID (University of Bergen, Norway)
Material:	Slides

15:00 Intro to Git 1h0'

Speaker:	Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

16:00 Coffee break 30'
16:30 Hands-on: Project Euler Using Git 2h0'

Speaker: David GRELLSCHEID (University of Bergen, Norway), Ali FARNUDI (École normale supérieure de Lyon, France)

Tuesday, 29 November 2022

09:30 - 18:30

Location:

Adriatico Guest House - Giambiagi Lecture Hall

09:30 Basic of Programming 1h15'

Speaker:	Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

10:45 Coffee break 30'

11:15 Intro to Numpy/Scipy 1h15'

Speaker:	Ivan GIROTTO (ICTP, Italy)
Material:	Slides

12:30 Lunch break 1h30'

14:00 Hands-on: Python for Scientific Computing 2h0'

Speaker:	David GRELLSCHEID (University of Bergen, Norway)
Material:	Slides

16:00 Coffee break 30'
16:30 Hands-on: Python for Scientific Computing 2h0'

Speaker: David GRELLSCHEID (University of Bergen, Norway)

Wednesday, 30 November 2022

09:30 - 18:30

Location:

Adriatico Guest House - Giambiagi Lecture Hall

09:30 Advanced Git 1h15'

Speaker:	Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

10:45 Coffee break 30'

11:15 Object Oriented Programming 1h15'

Speaker:	David GRELLSCHEID (University of Bergen, Norway)
Material:	Slides

12:30 Lunch break 1h30'

14:00 OO in Python 1h0'

Speaker:	Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

15:00 Hands-on: OO 1h0'

Speaker:	Ali FARNUDI (École normale supérieure de Lyon, France), David GRELLSCHEID (University of Bergen, Norway)
Material:	Slides

16:00 Coffee break 30'
16:30 Hands-on: OO 2h0'

Speaker: Ali FARNUDI (École normale supérieure de Lyon, France), David GRELLSCHEID (University of Bergen, Norway)

Thursday, 1 December 2022

09:30 - 18:30

Location:

Adriatico Guest House - Giambiagi Lecture Hall

09:30 Code Design, Algorithms & Optimization 1h15'

Speaker:	David GRELLSCHEID (University of Bergen, Norway)
Material:	Slides

10:45 Coffee break 30'

11:15 Compiled Codes 1h15'

Speaker:	Ivan GIROTTO (ICTP, Italy)
Material:	Slides

12:30 Lunch break 1h30'

14:00 Unit Testing 1h0'

Speaker:	Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

15:00 Floating Point 1h0'

Speaker: David GRELLSCHEID (University of Bergen, Norway)
16:00 Coffee break 30'

16:30 Python Packaging 2h0'

Speaker:	Ali FARNUDI (École normale supérieure de Lyon, France), David GRELLSCHEID (University of Bergen, Norway)
Material:	Slides

Friday, 2 December 2022

09:30 - 18:30

Location:

Adriatico Guest House - Giambiagi Lecture Hall

09:30 Visualization 1h15'

Speaker:	Laura GARRISON (University of Bergen, Norway)
Material:	Slides

10:45 Coffee break 30'

11:15 Visualization 1h15'

Speaker:	Laura GARRISON (University of Bergen, Norway)
Material:	Slides

12:30 Lunch break 1h30'

14:00 Visualization 2h0'

Speaker:	Laura GARRISON (University of Bergen, Norway)
Material:	Slides

16:00 Coffee break 30'

16:30 Visualization 2h0'

Speaker:	Laura GARRISON (University of Bergen, Norway)
Material:	Slides

Monday, 5 December 2022

09:30 - 18:30

Location:

Adriatico Guest House - Kastler Lecture Hall

09:30 Conversational Development 1h15'

Speaker:	Alessandro CORBETTA (TU/e, Netherlands)
Material:	Slides

10:45 Coffee break 30'

11:15 Development Projects Setup 1h15'

Speaker:	Ivan GIROTTO (ICTP, Italy), Laura GARRISON (University of Bergen, Norway), Alessandro CORBETTA (TU/e, Netherlands), David GRELLSCHEID (University of Bergen, Norway), Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

12:30 Lunch break 1h30'
14:00 Test Suites and Continuous Integration 2h0'

Speaker: Alessandro CORBETTA (TU/e, Netherlands)
16:00 Coffee break 30'

16:30 Hands-on: Set up and plan Group Projects 2h0'

Speaker:	Ivan GIROTTO (ICTP, Italy), Laura GARRISON (University of Bergen, Norway), Alessandro CORBETTA (TU/e, Netherlands), David GRELLSCHEID (University of Bergen, Norway), Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

Tuesday, 6 December 2022

09:30 - 18:30

Location:

Adriatico Guest House - Kastler Lecture Hall

09:30 Docker usage in CI 1h15'

Speaker:	Alessandro CORBETTA (TU/e, Netherlands)
Material:	Slides

10:45 Coffee break 30'
11:15 Animations 1h15'

Speaker: Laura GARRISON (University of Bergen, Norway)
12:30 Lunch break 1h30'

14:00 Hands-on: Work on Group Projects 2h0'

Speaker:	Ivan GIROTTO (ICTP, Italy), Laura GARRISON (University of Bergen, Norway), Alessandro CORBETTA (TU/e, Netherlands), David GRELLSCHEID (University of Bergen, Norway), Ali FARNUDI (École normale supérieure de Lyon, France)
Material:	Slides

16:00 Coffee break 30'

16:30 Hands-on: Work on Group Projects 2h0'

Speaker:

Ivan GIROTTO (ICTP, Italy), Laura GARRISON (University of Bergen, Norway), Alessandro CORBETTA (TU/e, Netherlands), David GRELLSCHEID (University of Bergen, Norway), Ali FARNUDI (École normale supérieure de Lyon, France)

Wednesday, 7 December 2022

09:30 - 17:30

09:30 Makefiles for workflows 1h15'

Speaker: Ali FARNUDI (École normale supérieure de Lyon, France)
10:45 Group photo 2'
10:45 Coffee break 30'
11:15 Documentation 1h15'

Speaker: David GRELLSCHEID (University of Bergen, Norway)
12:30 Lunch break 1h30'

14:00 Hands-on: Work on Group Projects 2h0'

Speaker:

16:00 Coffee break 30'

16:30 Hands-on: Work on Group Projects 1h0'

Speaker:

19:30 - 21:30
- 19:30 All together dinner 2h0'

Thursday, 8 December 2022

09:30 - 18:30

Location:

Adriatico Guest House - Kastler Lecture Hall

09:30 Development Experience 1h0'

Speaker:

10:45 Coffee break 30'

11:15 Hands-on: Work on Group Projects 1h15'

Speaker:

12:30 Lunch break 1h30'

14:00 Hands-on: Work on Group Projects 2h0'

Speaker:

16:00 Coffee break 30'

16:30 Hands-on: Work on Group Projects 2h0'

Speaker:

Friday, 9 December 2022
- 09:30 - 12:30
  
  Location: Adriatico Guest House - Kastler Lecture Hall
  - 09:30 Project Presentations Finalization 1h15'
  - 10:45 Coffee break 30'
  - 11:15 Project Presentations / Handing out of Certificates 1h15'
    
    Material: Project links