Informal seminar on Statistical Physics:"Information transmission in small gene regulatory networks"
Starts 18 Jul 2011 17:30
Ends 18 Jul 2011 20:00
Central European Time
Leonardo da Vinci Building Luigi Stasi Seminar Room
Strada Costiera, 11
I - 34151 Trieste (Italy)
Many of the biological networks inside cells can be thought of as transmitting information from the inputs (e.g., the concentrations of transcription factors or other signaling molecules) to their outputs (e.g., the expression levels of various genes). On the molecular level, the relatively small concentrations of the relevant molecules and the intrinsic randomness of chemical reactions provide sources of noise that set physical limits on this information transmission. Given these limits, not all networks perform equally well, and maximizing information transmission provides a optimization principle from which we might hope to derive the properties of real regulatory networks. Inspired by the precision of transmission of positional information in the early development of the fly embryo, I will discuss the properties of specific small networks that can transmit the maximum information. Concretely, I will show how the form of molecular noise drives predictions not just of the qualitative network topology but also the quantitative parameters for the input/output relations at the nodes of the network. I will show how the molecular details of regulation change the networks ability to transmit information.