School and Conference: From Biological Networks to Cellular Function: Evolution, Dynamics and Spatial Organization | (smr 2041)
Go to day
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09:00 - 10:00
REGISTRATION
Location: Leonardo da Vinci Building, Lobby - 09:00 REGISTRATION 1h0'
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10:00 - 11:00
Complex networks of biomolecular interactions and chromosome architecture
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10:00
Complex networks of biomolecular interactions and chromosome architecture
1h0'
Speaker: F. KEPES Material: Presentation
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10:00
Complex networks of biomolecular interactions and chromosome architecture
1h0'
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11:00 - 11:30
Coffee break
- 11:00 Coffee break 30'
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11:30 - 12:30
Complex networks of biomolecular interactions and chromosome architecture
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11:30
Complex networks of biomolecular interactions and chromosome architecture
1h0'
Speaker: F. KEPES
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11:30
Complex networks of biomolecular interactions and chromosome architecture
1h0'
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12:30 - 14:00
Lunch
- 12:30 Lunch 1h30'
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14:00 - 15:00
Complex networks of biomolecular interactions and chromosome architecture
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14:00
Complex networks of biomolecular interactions and chromosome architecture
1h0'
Speaker: F. KEPES
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14:00
Complex networks of biomolecular interactions and chromosome architecture
1h0'
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15:00 - 16:00
Introduction to the dynamics and evolution of metabolic networks
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15:00
Introduction to the dynamics and evolution of metabolic networks
1h0'
Speaker: D. SEGRE
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15:00
Introduction to the dynamics and evolution of metabolic networks
1h0'
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16:00 - 16:30
Coffee break
- 16:00 Coffee break 30'
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16:30 - 17:30
Introduction to the dynamics and evolution of metabolic networks
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16:30
Introduction to the dynamics and evolution of metabolic networks
1h0'
Speaker: D. SEGRE
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16:30
Introduction to the dynamics and evolution of metabolic networks
1h0'
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09:00 - 10:00
REGISTRATION
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09:00 - 10:00
Introduction to the dynamics and evolution of metabolic networks
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09:00
Introduction to the dynamics and evolution of metabolic networks
1h0'
Speaker: D. SEGRE
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09:00
Introduction to the dynamics and evolution of metabolic networks
1h0'
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10:00 - 11:00
Introduction to biological evolution
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10:00
Introduction to biological evolution
1h0'
Speaker: M. LAESSIG
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10:00
Introduction to biological evolution
1h0'
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11:00 - 11:30
Coffee break
- 11:00 Coffee break 30'
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11:30 - 12:30
Introduction to biological evolution
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11:30
Introduction to biological evolution
1h0'
Speaker: M. LAESSIG
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11:30
Introduction to biological evolution
1h0'
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12:30 - 14:00
Lunch
- 12:30 Lunch 1h30'
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14:00 - 15:00
Some principles of molecular evolution
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14:00
Some principles of molecular evolution
1h0'
Speaker: A. WAGNER Material: Presentation
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14:00
Some principles of molecular evolution
1h0'
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15:00 - 16:00
Some principles of molecular evolution
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15:00
Some principles of molecular evolution
1h0'
Speaker: A. WAGNER
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15:00
Some principles of molecular evolution
1h0'
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16:00 - 16:30
Coffee break
- 16:00 Coffee break 30'
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16:30 - 17:30
Complex networks of biomolecular interactions and chromosome architecture
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16:30
Complex networks of biomolecular interactions and chromosome architecture
1h0'
Speaker: F. KEPES
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16:30
Complex networks of biomolecular interactions and chromosome architecture
1h0'
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19:30 - 21:30
RECEPTION
- 19:30 RECEPTION 2h0'
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09:00 - 10:00
Introduction to the dynamics and evolution of metabolic networks
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08:30 - 09:00
REGISTRATION
Location: Leonardo da Vinci Building, Lobby - 08:30 REGISTRATION 30'
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09:00 - 09:40
Artificial Regulatory Networks
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09:00
Artificial Regulatory Networks
40'
Speaker: W. BANZHAF
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09:00
Artificial Regulatory Networks
40'
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09:40 - 10:20
Integration of Experiments and Metabolic Modeling Facilitate Network Design & Biological Discovery
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09:40
Integration of Experiments and Metabolic Modeling Facilitate Network Design & Biological Discovery
40'
Speaker: J. REED Material: abstract
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09:40
Integration of Experiments and Metabolic Modeling Facilitate Network Design & Biological Discovery
40'
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10:20 - 11:00
On the relationship between robustness and evolutionary innovation
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10:20
On the relationship between robustness and evolutionary innovation
40'
Speaker: A. WAGNER
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10:20
On the relationship between robustness and evolutionary innovation
40'
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11:00 - 11:30
Coffee break
- 11:00 Coffee break 30'
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11:30 - 12:10
Individual histories and selection in population dynamics
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11:30
Individual histories and selection in population dynamics
40'
Speaker: E. KUSELL
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11:30
Individual histories and selection in population dynamics
40'
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12:10 - 12:50
The impact of alterations in genomic neighbourhood on human evolution
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12:10
The impact of alterations in genomic neighbourhood on human evolution
40'
Speaker: M. BABU
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12:10
The impact of alterations in genomic neighbourhood on human evolution
40'
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12:50 - 14:20
Lunch
- 12:50 Lunch 1h30'
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14:20 - 15:00
TBA
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14:20
TBA
40'
Speaker: R. ZECCHINA
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14:20
TBA
40'
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15:00 - 15:40
Biological strategies of motility
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15:00
Biological strategies of motility
40'
Speaker: M. VERGASSOLA
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15:00
Biological strategies of motility
40'
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15:40 - 16:20
About preservation of properties along embedding of biological
regulatory networks
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15:40
About preservation of properties along embedding of biological
regulatory networks
40'
Speaker: M. MABROUKI Material: abstract
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15:40
About preservation of properties along embedding of biological
regulatory networks
40'
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16:20 - 16:40
Coffee break
- 16:20 Coffee break 20'
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16:40 - 17:20
Neutral networks and evolutionary dynamics
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16:40
Neutral networks and evolutionary dynamics
40'
Speaker: O. MARTIN
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16:40
Neutral networks and evolutionary dynamics
40'
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17:20 - 18:00
The specificity of bacterial protein-protein interactions & the inverse Potts problem
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17:20
The specificity of bacterial protein-protein interactions & the inverse Potts problem
40'
Speaker: A. PROCACCINI Material: abstract
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17:20
The specificity of bacterial protein-protein interactions & the inverse Potts problem
40'
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08:30 - 09:00
REGISTRATION
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09:00 - 09:40
Modeling nucleosome mediated epigenetics and gene regulation
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09:00
Modeling nucleosome mediated epigenetics and gene regulation
40'
Speaker: K. SNEPPEN
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09:00
Modeling nucleosome mediated epigenetics and gene regulation
40'
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09:40 - 10:20
Modeling the circadian clock: From molecular mechanism to physiological disorders
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09:40
Modeling the circadian clock: From molecular mechanism to physiological disorders
40'
Speaker: J.-C. LELOUP Material: abstract
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09:40
Modeling the circadian clock: From molecular mechanism to physiological disorders
40'
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10:20 - 11:00
Laws of prokaryotic genome evolution
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10:20
Laws of prokaryotic genome evolution
40'
Speaker: E. VAN NIMWEGEN Material: abstract
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10:20
Laws of prokaryotic genome evolution
40'
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11:00 - 11:30
Coffee break
- 11:00 Coffee break 30'
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11:30 - 12:10
"Home depot" model of evolution of prokaryotic metabolic networks and their regulation
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11:30
"Home depot" model of evolution of prokaryotic metabolic networks and their regulation
40'
Speaker: S. MASLOV Material: abstract
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11:30
"Home depot" model of evolution of prokaryotic metabolic networks and their regulation
40'
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12:10 - 12:50
Modeling large-scale metabolic networks: Structure, Function and Evolution
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12:10
Modeling large-scale metabolic networks: Structure, Function and Evolution
40'
Speaker: O. EBENHOEH
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12:10
Modeling large-scale metabolic networks: Structure, Function and Evolution
40'
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12:50 - 14:20
Lunch
- 12:50 Lunch 1h30'
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14:20 - 15:00
Structure and Boolean dynamics of E. coli's genetic regulatory network: Origin of homeostasis and flexibility of response
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14:20
Structure and Boolean dynamics of E. coli's genetic regulatory network: Origin of homeostasis and flexibility of response
40'
Speaker: S. JAIN
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14:20
Structure and Boolean dynamics of E. coli's genetic regulatory network: Origin of homeostasis and flexibility of response
40'
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15:00 - 15:40
Adaptive Environmental Conditioning: Prediction of Environmental Changes by Micro-Organisms
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15:00
Adaptive Environmental Conditioning: Prediction of Environmental Changes by Micro-Organisms
40'
Speaker: A. MITCHELL
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15:00
Adaptive Environmental Conditioning: Prediction of Environmental Changes by Micro-Organisms
40'
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15:40 - 16:20
Network ensembles and the definition of priors in genetic network inference problems
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15:40
Network ensembles and the definition of priors in genetic network inference problems
40'
Speaker: G. BIANCONI
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15:40
Network ensembles and the definition of priors in genetic network inference problems
40'
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16:20 - 16:40
Coffee break
- 16:20 Coffee break 20'
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16:40 - 17:20
Calibration of a genetic network model for maternal and gap genes in Drosophila
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16:40
Calibration of a genetic network model for maternal and gap genes in Drosophila
40'
Speaker: D. MURARO Material: abstract
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16:40
Calibration of a genetic network model for maternal and gap genes in Drosophila
40'
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17:20 - 18:00
Transcriptional regulation: consequences on chromosome structuring and genome organization
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17:20
Transcriptional regulation: consequences on chromosome structuring and genome organization
40'
Speaker: I. JUNIER
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17:20
Transcriptional regulation: consequences on chromosome structuring and genome organization
40'
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09:00 - 09:40
Modeling nucleosome mediated epigenetics and gene regulation
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09:00 - 09:40
Analysis of the spatial organization of the bacterial chromosome
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09:00
Analysis of the spatial organization of the bacterial chromosome
40'
Speaker: O. ESPELI Material: abstract
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09:00
Analysis of the spatial organization of the bacterial chromosome
40'
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09:40 - 10:20
Spectrally Assigned Localization Microscopy: A new lightoptical approach to study chromosome geometry on the nanoscale
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09:40
Spectrally Assigned Localization Microscopy: A new lightoptical approach to study chromosome geometry on the nanoscale
40'
Speaker: C. CREMER Material: abstract
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09:40
Spectrally Assigned Localization Microscopy: A new lightoptical approach to study chromosome geometry on the nanoscale
40'
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10:20 - 11:00
Coarse-grained Simulations of DNA knotting in conned geometries
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10:20
Coarse-grained Simulations of DNA knotting in conned geometries
40'
Speaker: C. MICHELETTI Material: abstract
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10:20
Coarse-grained Simulations of DNA knotting in conned geometries
40'
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11:00 - 11:30
Coffee break
- 11:00 Coffee break 30'
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11:30 - 12:10
Viable flux states in metabolic networks: a statistical physics perspective
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11:30
Viable flux states in metabolic networks: a statistical physics perspective
40'
Speaker: A. DE MARTINO Material: abstract
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11:30
Viable flux states in metabolic networks: a statistical physics perspective
40'
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12:10 - 12:50
Modeling nucleosome mediated epigenetics and gene regulation
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12:10
Modeling nucleosome mediated epigenetics and gene regulation
40'
Speaker: D. FERNANDEZ
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12:10
Modeling nucleosome mediated epigenetics and gene regulation
40'
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12:50 - 14:20
Lunch
- 12:50 Lunch 1h30'
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09:00 - 09:40
Analysis of the spatial organization of the bacterial chromosome